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disease ontology (metacoretm software suite)  (GeneGo Inc)

 
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    GeneGo Inc disease ontology (metacoretm software suite)
    Disease Ontology (Metacoretm Software Suite), supplied by GeneGo Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/metacoretm+ontology/disease+ontology++metacoretm+software+suite+/pmc05867002-215-14-14
    Average 90 stars, based on 1 article reviews
    disease ontology (metacoretm software suite) - by Bioz Stars, 2026-10
    90/100 stars

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    other:

    Article Title: Using gene expression profiling to evaluate cellular responses in mouse lungs exposed to V2O5 and a group of other mouse lung tumorigens and non-tumorigens.
    Article Snippet: Many compounds test positive for lung tumors in two-year NTP carcinogenicity bioassays in B6C3F1 mice.. V2O5 was identified as a lung carcinogen in this assay, leading to its IARC (International Agency for Research on Cancer) classification as group 2b or a “possible” human carcinogen.. To assess potential tumorigenic mode of action of V2O5, we compared gene expression and gene ontology enrichment in lung tissue of female B6C3F1 mice exposed for 13 weeks to a V2O5 particulate aerosol at a tumorigenic level (2.0 mg/m3).

    Phospho-proteomics:

    Article Title: Proteomic Characterization of Novel Alternative Splice Variant Proteins in HER2/neu-induced Breast Cancers
    Article Snippet: .. The number in parentheses indicate the number of occurences of Prosite patterns or frequent match producers Prosite patterns in Differentially expressed known variants Prosite patterns in randomly selected normal proteins CK2 phosphorylation site (558) PKC phsophorylation site (393) N- myristoylation (486) CK2 phosphorylation site (382) PKC phsophorylation site (466) N- myristoylation (326) N-glycosylation site (127) N-glycosylation site (94) Amidation site (55) cAMP- and cGMP-dependent protein kinase phosphorylation site (48) Open in a separate window b. Statistically significant GeneGo biological process networks among the differentially expressed splice variants by MetacoreTM Ontology enrichment analysis Network process pValue gene symbols of differentially expressed alternative splice variants Cytoskeleton_Regulation of cytoskeleton rearrangement 4.45E-09 actn,cdc42,flnb,rdx,tln,vcl,ywhaz,zyx Cell adhesion_Integrin-mediated cell-matrix adhesion 2.91E-08 actn,cdc42,flnb,rhogdia,rdx,tln,vcl,zyx Immune_Phagocytosis 7.27E-05 actn,cdc42,rdx,vcl,vcp Cell adhesion_Amyloid proteins 1.40E-04 actn,cdc42,flnb,hspg2,nrxn3,rhogdia Response to hypoxia and oxidative stress 2.99E-04 cat,gapdh,gsto1,prdx5,sod1,xdh Cell adhesion_Platelet aggregation 3.52E-04 actn,tln,pla2,rap1b Development_Neurogenesis:Axonal guidance 5.79E-04 actn, cdc42, myh9,rdx,rhogdia,ywhah Cell adhesion_Synaptic contact 5.98E-04 actn,cdc42,nrxn3,ywhah Cytoskeleton_Intermediate filaments 1.47E-03 actn,tubb2c,ywhah Translation_Translation initiation 1.89E-03 eif4b,rpl6,rps2,rps3,rps24 Open in a separate window Table 3 ..



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